It may be separation anxiety if your pup shakes. You can actually get some medicine to ease the symptoms if you talk to your vet. You can also spend some time with her in the bathroom to make her like the place better. Have you tried crate training her? They learn to feel safe in their crates, and that might help. Oh, and one more thing, I remember reading that making your dog wear a shirt may help because the fabric embraces their body and makes them feel a little safer. I hope things will get better. Good luck.
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