After doing a LOT of research, I've found that there are no specific side effects to the dog flu vaccine that are any different from any other regular injected dog vaccine. Hence the link to the AVMA vaccine effects page that I gave above. The only other information specific to this vaccine that I found was from a vendor website:
Order Canine Influenza Vaccine | Canine Flu Vaccine Quote:
What are the side effects of Nobivac Canine Flu Bivalent Vaccine, 25 x 1 dose tray?
The use of a biological product may produce anaphylaxis and/or other inflammatory immune-mediated hypersensitivity reactions. Antidote: Epinephrine, corticosteroids, and antihistamines may all be indicated depending on the nature and severity of the reaction.
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Again, these are side effects common to all of the other regular vaccines.